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  5. Aob_g08351

Aob_g08351


Description : not classified & original description: none


Gene families : OG0001265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g08351

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00085080 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g079530 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g083877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21194.t1 Aspi01Gene21194 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g13480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G014900.1 Ceric.25G014900 not classified & original description: pacid=50594354... 0.01 OrthoFinder output from all 47 species
Ceric.27G020300.1 Ceric.27G020300 not classified & original description: pacid=50605628... 0.03 OrthoFinder output from all 47 species
Ceric.31G061400.1 Ceric.31G061400 not classified & original description: pacid=50575101... 0.02 OrthoFinder output from all 47 species
Dcu_g15768 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g09675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g11399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07743 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g33196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g090910.3.1 Solyc02g090910 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g00806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 13 78
IPR000504 RRM_dom 285 339
IPR000504 RRM_dom 101 161
No external refs found!