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  5. Lfl_g21817

Lfl_g21817


Description : not classified & original description: none


Gene families : OG0000588 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000588_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21817
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT4G20300 No alias Protein of unknown function (DUF1639) 0.02 OrthoFinder output from all 47 species
Adi_g060594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13450.t1 Aspi01Gene13450 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.33G057100.1 Ceric.33G057100 not classified & original description: pacid=50606363... 0.03 OrthoFinder output from all 47 species
Dcu_g09103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g59250.1 LOC_Os03g59250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10428910g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g33981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02712 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e020159_P004 Zm00001e020159 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005795 Golgi stack IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0008455 alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
CC GO:0031984 organelle subcompartment IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
CC GO:0098791 Golgi apparatus subcompartment IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR012438 DUF1639 414 463
No external refs found!