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  5. Aob_g07906

Aob_g07906


Description : regulatory protein *(GIL1) of phytochrome-mediated agravitropism & original description: none


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07906

Target Alias Description ECC score Gene Family Method Actions
Adi_g015240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27510 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28157 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04024 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.04 OrthoFinder output from all 47 species
Ala_g05010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00923.t1 Aspi01Gene00923 regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Ceric.06G053000.1 Ceric.06G053000 not classified & original description: pacid=50620800... 0.03 OrthoFinder output from all 47 species
Ceric.22G033000.1 Ceric.22G033000 regulatory protein *(GIL1) of phytochrome-mediated... 0.04 OrthoFinder output from all 47 species
Dac_g21015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g26797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09217 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30642 GIL1 regulator (GIL1) of phytochrome-mediated agravitropism 0.03 OrthoFinder output from all 47 species
LOC_Os05g11650.1 LOC_Os05g11650 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06041 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Ore_g30684 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007179 No alias not classified & original description: CDS=435-2498 0.06 OrthoFinder output from all 47 species
Sam_g21469 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0047746 chlorophyllase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 93 222
No external refs found!