Aliases : ACT7
Description : actin filament protein & original description: none
Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aob_g07722 | |
Cluster | HCCA: Cluster_36 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre13.g603700 | ACT11 | Cytoskeleton.microfilament network.actin filament protein | 0.01 | OrthoFinder output from all 47 species | |
Lfl_g22569 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g07984 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g14230 | ACT7 | actin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g078400.3.1 | ACT7, Solyc03g078400 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e005489_P002 | ACT11, Zm00001e005489 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e006282_P001 | ACT7, Zm00001e006282 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e012159_P001 | ACT11, Zm00001e012159 | actin filament protein | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000387 | spliceosomal snRNP assembly | IEP | HCCA |
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004000 | Actin | 5 | 377 |
No external refs found! |