Aob_g07705

Description : beta-type-5 component *(PBE) of 26S proteasome & original description: none

Gene families : OG0004761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004761_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g07705

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00083100	evm_27.TU.AmTr_v1...	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Aev_g09083	No alias	beta-type-5 component *(PBE) of 26S proteasome &...	0.04	OrthoFinder output from all 47 species
Ala_g01174	No alias	beta-type-5 component *(PBE) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Aop_g00419	No alias	beta-type-5 component *(PBE) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.44	No alias	Protein degradation.26S proteasome.20S core...	0.02	OrthoFinder output from all 47 species
Cre10.g461950	No alias	Protein degradation.26S proteasome.20S core...	0.03	OrthoFinder output from all 47 species
Mp2g06230.1	No alias	component beta type-5 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Nbi_g43610	No alias	beta-type-5 component *(PBE) of 26S proteasome &...	0.03	OrthoFinder output from all 47 species
Solyc05g056160.3.1	Solyc05g056160	component beta type-5 of 26S proteasome	0.04	OrthoFinder output from all 47 species
Zm00001e036472_P001	Zm00001e036472	component beta type-5 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0140535	intracellular protein-containing complex	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0008134	transcription factor binding	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	57	237

External Links

No external refs found!