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  5. Aob_g07535

Aob_g07535 (PSRP4)


Aliases : PSRP4

Description : component *(bTHXc) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0003575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003575_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g07535

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235620 PSRP4,... Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
AT2G38140 PSRP4 plastid-specific ribosomal protein 4 0.07 OrthoFinder output from all 47 species
Aev_g09530 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ala_g00113 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Als_g33915 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Aop_g00094 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025463 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Cba_g05525 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.36G025700.1 PSRP4, Ceric.36G025700 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Dac_g00361 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dde_g08576 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g30276 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01033979001 PSRP4 Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
LOC_Os05g09400.1 PSRP4, LOC_Os05g09400 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Lfl_g05135 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
MA_202598g0010 PSRP4 component psPSRP4 of small ribosomal subunit proteome 0.07 OrthoFinder output from all 47 species
Mp1g04130.1 PSRP4 component psPSRP4 of small ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Msp_g01793 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g00050 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Pir_g00298 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ppi_g04757 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021882 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g47706 No alias component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Spa_g46754 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Tin_g08590 PSRP4 component *(bTHXc) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Zm00001e018923_P004 PSRP4, Zm00001e018923 component psPSRP4 of small ribosomal subunit proteome 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005840 ribosome IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004751 ribose-5-phosphate isomerase activity IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0009052 pentose-phosphate shunt, non-oxidative branch IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR030826 Ribo_THX 37 106
No external refs found!