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  5. Aob_g06701

Aob_g06701 (PAB2, PABP2, ATPAB2)


Aliases : PAB2, PABP2, ATPAB2

Description : mRNA poly-A-tail binding factor *(PABP) & original description: none


Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06701
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00257980 PAB7,... Protein biosynthesis.translation initiation.mRNA... 0.04 OrthoFinder output from all 47 species
Adi_g075125 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species
Als_g23023 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Als_g32811 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.03 OrthoFinder output from all 47 species
Als_g41845 PABP4, PAB4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0280.g062302 PAB2, PABP2, ATPAB2 mRNA poly-A-tail binding factor *(PABP) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR002004 PABP_HYD 560 624
IPR000504 RRM_dom 118 185
IPR000504 RRM_dom 209 277
IPR000504 RRM_dom 30 100
IPR000504 RRM_dom 312 380
No external refs found!