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  5. Aob_g06697

Aob_g06697 (CASP, AtCASP)


Aliases : CASP, AtCASP

Description : Golgin-type membrane tethering protein *(CASP) & original description: none


Gene families : OG0004640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06697

Target Alias Description ECC score Gene Family Method Actions
AT3G18480 CASP, AtCASP CCAAT-displacement protein alternatively spliced product 0.04 OrthoFinder output from all 47 species
Adi_g022485 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Als_g01937 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50599.t1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007796 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Ceric.18G007100.1 CASP, AtCASP,... Golgin-type membrane tethering protein *(CASP) &... 0.05 OrthoFinder output from all 47 species
Cre04.g223900 CASP, AtCASP No description available 0.01 OrthoFinder output from all 47 species
Cre08.g382650 CASP, AtCASP Vesicle trafficking.target membrane tethering.Golgi... 0.02 OrthoFinder output from all 47 species
Dcu_g12650 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.05 OrthoFinder output from all 47 species
Ehy_g02808 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Len_g00690 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Lfl_g01912 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Mp6g21020.1 CASP, AtCASP golgin (CASP) 0.02 OrthoFinder output from all 47 species
Nbi_g04869 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.04 OrthoFinder output from all 47 species
Ppi_g14626 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0259.g026865 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.03 OrthoFinder output from all 47 species
Solyc06g069210.3.1 CASP, AtCASP,... golgin (CASP) 0.04 OrthoFinder output from all 47 species
Tin_g20724 CASP, AtCASP Golgin-type membrane tethering protein *(CASP) &... 0.02 OrthoFinder output from all 47 species
Zm00001e012195_P001 CASP, AtCASP,... golgin (CASP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEA Interproscan
BP GO:0006891 intra-Golgi vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR012955 CASP_C 446 673
No external refs found!