Aob_g06627 (SK21, ASK21)

Aliases : SK21, ASK21

Description : ASK-type linker component of SCF E3 ubiquitin ligase complexes & original description: none

Gene families : OG0005505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005505_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g06627

Target	Alias	Description	ECC score	Gene Family Method
Adi_g059926	SK20, ASK20	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g20096	SK21, ASK21	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Ceric.06G090100.1	SK21, ASK21,...	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Dcu_g04680	SK21, ASK21	ASK-type linker component of SCF E3 ubiquitin ligase...	0.03	OrthoFinder output from all 47 species
Lfl_g35005	SK20, ASK20	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Sam_g28631	No alias	ASK-type linker component of SCF E3 ubiquitin ligase...	0.02	OrthoFinder output from all 47 species
Solyc06g036070.3.1	SK21, ASK21,...	target protein binding component SKP1/ASK1 of...	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR016072	Skp1_comp_dimer	137	174

External Links

No external refs found!