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  5. Aob_g06573

Aob_g06573 (LZF1, STH3, DBB3)


Aliases : LZF1, STH3, DBB3

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06573

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00215760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00021p00250410 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AMTR_s00066p00204180 STO,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.03 OrthoFinder output from all 47 species
AT4G10240 No alias B-box zinc finger family protein 0.05 OrthoFinder output from all 47 species
Adi_g057497 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13138 STO BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g33521 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36004 STO not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01696 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08384.t1 LZF1, STH3,... BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene09321.t1 Aspi01Gene09321 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62651.t1 Aspi01Gene62651 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009705 No alias BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056620 STO BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.31G000800.1 LZF1, STH3,... BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g21582 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37029 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02213 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Gb_39727 STH transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g41560.2 STO, LOC_Os04g41560 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os09g35880.1 LOC_Os09g35880 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
MA_3117g0010 STH no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g00501 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07843 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15051 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65956 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20549 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g03820 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo111647 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Spa_g29582 STH BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g56814 No alias BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09563 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007720_P001 STO, Zm00001e007720 transcription factor (BBX-DBB) 0.06 OrthoFinder output from all 47 species
Zm00001e022915_P001 STO, Zm00001e022915 transcription factor (BBX-DBB) 0.05 OrthoFinder output from all 47 species
Zm00001e023122_P002 STH2, Zm00001e023122 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 4 47
IPR000315 Znf_B-box 55 97
No external refs found!