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  5. Aob_g06460

Aob_g06460 (CcdA)


Aliases : CcdA

Description : assembly factor CcdA of CCS cytochrome f/c6 maturation system (system II) & original description: none


Gene families : OG0007286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g06460
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00174500 CcdA,... Photosynthesis.photophosphorylation.cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Adi_g026246 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Aev_g07709 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Ala_g10332 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Aop_g12125 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Cba_g16816 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Ceric.02G048700.1 CcdA, Ceric.02G048700 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.11 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.02 OrthoFinder output from all 47 species
Dac_g07775 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species
Dde_g04751 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
GSVIVT01014430001 CcdA Photosynthesis.photophosphorylation.cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Gb_35619 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04500.1 CcdA, LOC_Os11g04500 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
LOC_Os12g04270.1 CcdA, LOC_Os12g04270 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Lfl_g28455 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Mp5g11540.1 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.02 OrthoFinder output from all 47 species
Msp_g37293 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Nbi_g07517 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ore_g21830 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Pir_g06323 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Ppi_g15921 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.03 OrthoFinder output from all 47 species
Sam_g09743 No alias assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Sam_g28294 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g063570.4.1 CcdA, Solyc07g063570 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.04 OrthoFinder output from all 47 species
Spa_g16978 CcdA assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.06 OrthoFinder output from all 47 species
Zm00001e009192_P002 CcdA, Zm00001e009192 assembly factor CcdA of CCS cytochrome f/c6 maturation... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017004 cytochrome complex assembly IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0004392 heme oxygenase (decyclizing) activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006788 heme oxidation IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016712 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0042168 heme metabolic process IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR003834 Cyt_c_assmbl_TM_dom 152 359
No external refs found!