Aob_g06334 (PSB28)

Aliases : PSB28

Description : protein involved in PS-II assembly *(Psb28) & original description: none

Gene families : OG0005594 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005594_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aob_g06334
Cluster	HCCA: Cluster_8

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00160690	PSB28,...	Photosynthesis.photophosphorylation.photosystem...	0.03	OrthoFinder output from all 47 species
AT4G28660	PSB28	photosystem II reaction center PSB28 protein	0.02	OrthoFinder output from all 47 species
Ala_g08604	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.02	OrthoFinder output from all 47 species
Ceric.07G032000.1	PSB28, Ceric.07G032000	protein involved in PS-II assembly *(Psb28) & original...	0.03	OrthoFinder output from all 47 species
Dac_g09174	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g46324	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.03	OrthoFinder output from all 47 species
Ehy_g01982	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.03	OrthoFinder output from all 47 species
LOC_Os01g71190.1	PSB28, LOC_Os01g71190	Psb28 protein involved in PS-II assembly	0.03	OrthoFinder output from all 47 species
Mp2g14630.1	PSB28	Psb28 protein involved in PS-II assembly	0.02	OrthoFinder output from all 47 species
Nbi_g14351	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.03	OrthoFinder output from all 47 species
Ore_g32149	PSB28	protein involved in PS-II assembly *(Psb28) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e018703_P001	PSB28, Zm00001e018703	Psb28 protein involved in PS-II assembly	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
CC	GO:0009654	photosystem II oxygen evolving complex	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
CC	GO:1902494	catalytic complex	None	Extended
CC	GO:1990204	oxidoreductase complex	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005610	PSII_Psb28_class-1	76	181

External Links

No external refs found!