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  5. Aob_g05931

Aob_g05931 (CRR22)


Aliases : CRR22

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05931
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00177p00030580 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
AT2G03880 REME1 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g013355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12969 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g36029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67233 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g04271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14022 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31119 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43823 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g16544 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48863 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g66160.1 REME1, LOC_Os01g66160 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
Len_g16975 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g37802 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03353 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
Solyc03g114010.3.1 Solyc03g114010 Pentatricopeptide repeat-containing protein At2g29760,... 0.06 OrthoFinder output from all 47 species
Solyc07g008480.3.1 Solyc07g008480 Pentatricopeptide repeat-containing protein At3g14730... 0.05 OrthoFinder output from all 47 species
Spa_g27690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45601 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24933 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002552_P001 Zm00001e002552 RNA editing factor (SEL1/PDM1) 0.02 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.03 OrthoFinder output from all 47 species
Zm00001e031351_P001 EMB2261, Zm00001e031351 RNA editing factor (ECD1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 401 448
IPR002885 Pentatricopeptide_repeat 98 147
IPR002885 Pentatricopeptide_repeat 301 348
IPR002885 Pentatricopeptide_repeat 200 246
IPR002885 Pentatricopeptide_repeat 275 297
IPR002885 Pentatricopeptide_repeat 478 500
IPR002885 Pentatricopeptide_repeat 174 199
No external refs found!