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  5. Aob_g05838

Aob_g05838


Description : deubiquitinase & original description: none


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05838
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G47740 No alias PPPDE putative thiol peptidase family protein 0.04 OrthoFinder output from all 47 species
GSVIVT01009662001 No alias Protein degradation.peptidase families.cysteine-type... 0.04 OrthoFinder output from all 47 species
Gb_01399 No alias peptidase (PPPDE) 0.03 OrthoFinder output from all 47 species
Zm00001e036330_P001 Zm00001e036330 peptidase (PPPDE) 0.02 OrthoFinder output from all 47 species
Zm00001e038787_P002 Zm00001e038787 peptidase (PPPDE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008233 peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 21 150
No external refs found!