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  5. Aob_g05747

Aob_g05747


Description : E3 ubiquitin ligase *(CHY) & original description: none


Gene families : OG0002193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05747

Target Alias Description ECC score Gene Family Method Actions
Cre17.g718300 No alias E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Len_g03230 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03053 No alias E3 ubiquitin ligase *(CHY) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR008913 Znf_CHY 84 164
IPR001841 Znf_RING 218 261
IPR039512 RCHY1_zinc-ribbon 266 324
No external refs found!