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  5. Aob_g05740

Aob_g05740


Description : GTPase effector *(BDR) & original description: none


Gene families : OG0000666 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000666_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05740
Cluster HCCA: Cluster_187

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00180180 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00165p00000750 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G75160 No alias Protein of unknown function (DUF620) 0.05 OrthoFinder output from all 47 species
AT5G66740 No alias Protein of unknown function (DUF620) 0.03 OrthoFinder output from all 47 species
Adi_g063519 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11944 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37858 No alias GTPase effector *(BDR) & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61705.t1 Aspi01Gene61705 GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62837.t1 Aspi01Gene62837 GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.13G005400.1 Ceric.13G005400 GTPase effector *(BDR) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G055700.1 Ceric.22G055700 GTPase effector *(BDR) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.33G036700.1 Ceric.33G036700 GTPase effector *(BDR) & original description:... 0.02 OrthoFinder output from all 47 species
Dde_g11719 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009382001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01009692001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_21083 No alias GTPase effector (BDR) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16060.1 LOC_Os03g16060 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
LOC_Os12g39160.1 LOC_Os12g39160 GTPase effector (BDR) 0.04 OrthoFinder output from all 47 species
Len_g05364 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19621 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431995g0010 No alias GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
MA_10431995g0020 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g02758 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g05835 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03609 No alias GTPase effector *(BDR) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012864 No alias GTPase effector *(BDR) & original description: CDS=941-2152 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024239 No alias GTPase effector *(BDR) & original description: CDS=316-1776 0.03 OrthoFinder output from all 47 species
Sam_g12477 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g107350.3.1 Solyc01g107350 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Solyc04g078190.4.1 Solyc04g078190 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc05g052860.3.1 Solyc05g052860 GTPase effector (BDR) 0.01 OrthoFinder output from all 47 species
Solyc07g022840.1.1 Solyc07g022840 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species
Spa_g01533 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g03708 No alias GTPase effector *(BDR) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14827 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g47866 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g10034 No alias GTPase effector *(BDR) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001181_P001 Zm00001e001181 GTPase effector (BDR) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006873 DUF620 130 369
No external refs found!