1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g21572

Lfl_g21572 (ARAD1)


Aliases : ARAD1

Description : 1,5-alpha-arabinosyltransferase *(ARAD) & original description: none


Gene families : OG0000774 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000774_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g21572
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
Ala_g04473 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
Aop_g04373 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.06 OrthoFinder output from all 47 species
Dac_g13109 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.04 OrthoFinder output from all 47 species
Dac_g14155 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_02382 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os12g03100.1 LOC_Os12g03100 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g02380.1 No alias Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g08390 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.03 OrthoFinder output from all 47 species
Ore_g29386 ARAD1 1,5-alpha-arabinosyltransferase *(ARAD) & original... 0.02 OrthoFinder output from all 47 species
Pir_g14907 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13185 EDA5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g062600.3.1 Solyc08g062600 Probable arabinosyltransferase ARAD1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g50482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006897 endocytosis IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR040911 Exostosin_GT47 88 398
No external refs found!