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  5. Aob_g05268

Aob_g05268 (ATCIMS, ATMS1, ATMETS)


Aliases : ATCIMS, ATMS1, ATMETS

Description : EC_2.1 transferase transferring one-carbon group & original description: none


Gene families : OG0000901 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05268
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Aev_g02500 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Als_g12775 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Als_g26432 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene10415.t1 ATCIMS, ATMS1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40772.t1 ATCIMS, ATMS1,... EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Dcu_g14356 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Dcu_g20010 ATCIMS, ATMS1, ATMETS not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_12328 ATCIMS, ATMS1, ATMETS 5-methyltetrahydropteroyltriglutamate--homocysteine... 0.02 OrthoFinder output from all 47 species
Msp_g34030 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.01 OrthoFinder output from all 47 species
Spa_g03147 ATCIMS, ATMS1, ATMETS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06170 MS2, ATMS2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14432 ATCIMS, ATMS1, ATMETS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14699 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g15406 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g41877 ATCIMS, ATMS1, ATMETS EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g41923 ATCIMS, ATMS1, ATMETS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45631 MS2, ATMS2 EC_2.1 transferase transferring one-carbon group &... 0.02 OrthoFinder output from all 47 species
Spa_g55645 ATCIMS, ATMS1, ATMETS not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0009086 methionine biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
BP GO:0006810 transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR013215 Cbl-indep_Met_Synth_N 3 317
IPR002629 Met_Synth_C/arc 433 756
No external refs found!