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  5. Aob_g05232

Aob_g05232 (BIM1)


Aliases : BIM1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0002413 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002413_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05232

Target Alias Description ECC score Gene Family Method Actions
Aob_g22071 BIM1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24314.t2 BIM2, Aspi01Gene24314 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12749 BIM1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020943.73 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Spa_g26053 BIM1 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e015706_P001 BIM1, Zm00001e015706 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 205 254
No external refs found!