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  5. Aob_g05116

Aob_g05116 (CPL4)


Aliases : CPL4

Description : subcluster H/CPL3-4 phosphatase & original description: none


Gene families : OG0001184 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001184_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g05116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00153170 ATCPL3, CPL3,... Protein modification.dephosphorylation.aspartate-based... 0.02 OrthoFinder output from all 47 species
Aev_g07941 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13479 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67117.t1 CPL4, Aspi01Gene67117 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G000800.1 ATCPL3, CPL3,... subcluster H/CPL3-4 phosphatase & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g20448 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.06 OrthoFinder output from all 47 species
Mp1g29700.1 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase 0.02 OrthoFinder output from all 47 species
Ore_g16661 ATCPL3, CPL3 subcluster H/CPL3-4 phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19075 CPL4 subcluster H/CPL3-4 phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g000884 CPL4 subcluster H/CPL3-4 phosphatase & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 427 488
IPR004274 FCP1_dom 171 342
No external refs found!