1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g04205

Aob_g04205


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g04205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00095620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Adi_g052692 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01879 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g09241 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10728 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13779 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g15949 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22498 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aop_g29692 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g15047 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g15907 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g23083 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g39820 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g46936 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g04920 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g32284 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g46940.1 KAN2, LOC_Os02g46940 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g25799.1 LOC_Os08g25799 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os10g39550.1 LOC_Os10g39550 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g40903 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01961 PHR1, AtPHR1 transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12418 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002208 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005961 KAN3 not classified & original description: CDS=52-843 0.03 OrthoFinder output from all 47 species
Sam_g12596 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18448 No alias KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g008200.3.1 PHL1, Solyc06g008200 PHR1 transcription factor involved in proline synthesis... 0.03 OrthoFinder output from all 47 species
Solyc06g066340.4.1 KAN2, Solyc06g066340 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g14987 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e013199_P003 Zm00001e013199 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e023282_P002 KAN2, Zm00001e023282 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e030364_P002 Zm00001e030364 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e035893_P001 Zm00001e035893 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 91 137
IPR001005 SANT/Myb 8 56
No external refs found!