1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g03843

Aob_g03843


Description : component *(uL18c) of large plastid ribosomal-subunit proteome & original description: none


Gene families : OG0005910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005910_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03843
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT1G48350 No alias Ribosomal L18p/L5e family protein 0.04 OrthoFinder output from all 47 species
Aev_g28610 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Aspi01Gene11541.t1 Aspi01Gene11541 component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.13G022200.1 Ceric.13G022200 component *(uL18c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Cre01.g052100 No alias Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
Dcu_g21381 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Dcu_g31625 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ehy_g02012 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01017720001 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Gb_12756 No alias component psRPL18 of large ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
LOC_Os03g61260.1 LOC_Os03g61260 component psRPL18 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Lfl_g00332 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
MA_7609850g0010 No alias 50S ribosomal protein L18, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp6g08500.1 No alias component psRPL18 of large ribosomal subunit proteome 0.06 OrthoFinder output from all 47 species
Ore_g07265 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ore_g34633 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ppi_g02809 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Sam_g19670 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Smo143891 No alias Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc12g098890.2.1 Solyc12g098890 component psRPL18 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species
Tin_g00498 No alias component *(uL18c) of large plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Zm00001e006246_P001 Zm00001e006246 component psRPL18 of large ribosomal subunit proteome 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005253 monoatomic anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008509 monoatomic anion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015108 chloride transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR005484 Ribosomal_L18 53 171
No external refs found!