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  5. Aob_g03571

Aob_g03571 (MGP)


Aliases : MGP

Description : C2H2 subclass IDD transcription factor & original description: none


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03571

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00077430 AtIDD7, IDD7,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
AT1G68130 IDD14, AtIDD14 indeterminate(ID)-domain 14 0.04 OrthoFinder output from all 47 species
AT2G02080 IDD4, AtIDD4 indeterminate(ID)-domain 4 0.03 OrthoFinder output from all 47 species
Adi_g099246 NUC not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18228 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g60888 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01010283001 IDD5, AtIDD5 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
GSVIVT01016867001 AtIDD7, IDD7 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 OrthoFinder output from all 47 species
GSVIVT01020612001 MGP RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 OrthoFinder output from all 47 species
LOC_Os01g51590.1 LOC_Os01g51590 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g45054.1 AtIDD12, IDD12,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
LOC_Os08g44050.1 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Solyc07g053570.4.1 MGP, Solyc07g053570 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Tin_g20981 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.06 OrthoFinder output from all 47 species
Zm00001e000780_P001 Zm00001e000780 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e000980_P002 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.06 OrthoFinder output from all 47 species
Zm00001e010628_P002 MGP, Zm00001e010628 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e016559_P001 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e034898_P001 IDD4, AtIDD4,... C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e035365_P003 MGP, Zm00001e035365 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 78 100
No external refs found!