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  5. Aob_g03263

Aob_g03263


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g03263

Target Alias Description ECC score Gene Family Method Actions
Adi_g077025 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Aev_g06518 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Ala_g01904 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ala_g09849 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Als_g23594 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Azfi_s0343.g065720 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Azfi_s3373.g115509 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cba_g50138 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ceric.28G016000.1 Ceric.28G016000 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dcu_g38581 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Dcu_g47805 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.04 OrthoFinder output from all 47 species
GSVIVT01019388001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
LOC_Os02g57740.1 LOC_Os02g57740 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
LOC_Os04g08450.3 LOC_Os04g08450 associated component SAP30 of histone deacetylase machineries 0.06 OrthoFinder output from all 47 species
Ppi_g30334 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022076 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023138 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Solyc08g081310.4.1 Solyc08g081310 associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Spa_g11049 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 157 210
No external refs found!