MA_122218g0010


Description : 27.3.4 RNA.regulation of transcription.ARF, Auxin Response Factor family Encodes an auxin response factor that


Gene families : OG_01_0000037 (Gene family) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_122218g0010
Cluster HCCA cluster: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT3G61830 ARF18 auxin response factor 18 0.02 Gene family
AT5G37020 ARF8, ATARF8 auxin response factor 8 0.02 Gene family
GSVIVT01021553001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
GSVIVT01025691001 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os04g36054 Os04g0442000 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
LOC_Os06g47150 Os06g0685700 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_10199543g0020 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
MA_40335g0010 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc01g103050.3.1 Solyc01g103050.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.03 Gene family
Solyc03g031970.3.1 Solyc03g031970.3 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d001879 GRMZM2G078274 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d001945 GRMZM2G034840 No description available 0.04 Gene family
Zm00001d017284 No alias 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d026540 GRMZM2G086949 No description available 0.03 Gene family
Zm00001d026590 GRMZM2G475882 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d031064 GRMZM2G081158 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d041497 GRMZM2G073750 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family
Zm00001d043922 GRMZM2G437460 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.02 Gene family
Zm00001d051172 GRMZM2G081406 27.3.4 RNA.regulation of transcription.ARF, Auxin... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan
CC GO:0005634 nucleus IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
BP GO:0009725 response to hormone IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003340 B3_DNA-bd 138 239
IPR010525 Auxin_resp 264 321
No external refs found!