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  5. Aob_g02373

Aob_g02373


Description : nucleoporin of nuclear pore complex *(NUP1/NUP136) & original description: none


Gene families : OG0002028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002028_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02373

Target Alias Description ECC score Gene Family Method Actions
Ala_g12464 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31899 No alias nucleoporin of nuclear pore complex *(NUP1/NUP136) &... 0.05 OrthoFinder output from all 47 species
Cba_g07760 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.03 OrthoFinder output from all 47 species
Ehy_g04036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g09860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0188.g025168 No alias nuclear lamina CRWN-interacting protein *(KAKU4) &... 0.03 OrthoFinder output from all 47 species
Solyc05g055110.4.1 Solyc05g055110 NUP1/NUP136 nucleoporin of nuclear pore complex 0.02 OrthoFinder output from all 47 species
Spa_g41786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!