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  5. Aob_g02173

Aob_g02173 (PLPB, PLPA, PLPC, PLP)


Aliases : PLPB, PLPA, PLPC, PLP

Description : UV-A/blue light photoreceptor *(PLP) & original description: none


Gene families : OG0002747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02173
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
Adi_g103753 PLPB, PLPA, PLPC, PLP not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012927 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original... 0.04 OrthoFinder output from all 47 species
Cba_g03233 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21360 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09026 PLPB, PLPA, PLPC, PLP UV-A/blue light photoreceptor *(PLP) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000014 PAS 88 178
IPR000014 PAS 327 429
No external refs found!