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  5. Aob_g02149

Aob_g02149 (ATNPR3, NPR3)


Aliases : ATNPR3, NPR3

Description : not classified & original description: none


Gene families : OG0001046 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001046_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g02149

Target Alias Description ECC score Gene Family Method Actions
Dcu_g11640 BOP2 transcriptional co-activator *(BOP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_20254g0010 BOP2 transcriptional co-activator (BOP) 0.02 OrthoFinder output from all 47 species
Nbi_g08873 ATNPR3, NPR3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06104 ATNPR3, NPR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0103.g019986 BOP1 not classified & original description: CDS=344-2182 0.03 OrthoFinder output from all 47 species
Sam_g07933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 324 377
IPR000210 BTB/POZ_dom 61 158
IPR021094 NPR1/NIM1-like_C 379 590
No external refs found!