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  5. Aob_g01806

Aob_g01806


Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g01806

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00081p00108570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Aob_g01754 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Aob_g02256 No alias regulatory protein *(KHZ) of autonomous floral-promotion... 0.02 OrthoFinder output from all 47 species
Aspi01Gene13463.t1 Aspi01Gene13463 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene13465.t1 Aspi01Gene13465 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0017.g014471 No alias not classified & original description: CDS=103-1737 0.02 OrthoFinder output from all 47 species
Cba_g17499 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Ceric.19G050600.1 Ceric.19G050600 not classified & original description: pacid=50576234... 0.03 OrthoFinder output from all 47 species
Dcu_g04048 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Msp_g08436 No alias regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Ore_g29816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30390 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ore_g32193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006700 No alias not classified & original description: CDS=150-1436 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022775 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0240.g026606 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Sam_g16004 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09583 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Tin_g11119 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Zm00001e040205_P001 Zm00001e040205 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 277 299
IPR000571 Znf_CCCH 198 223
IPR000571 Znf_CCCH 339 364
No external refs found!