Aliases : EIF4A-III
Description : helicase component *(eIF4A3) of RNA quality control Exon Junction complex & original description: none
Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Aob_g01779 | |
Cluster | HCCA: Cluster_166 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G13920 | TIF4A1, EIF4A1, RH4 | eukaryotic translation initiation factor 4A1 | 0.02 | OrthoFinder output from all 47 species | |
Aev_g07810 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13524 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Als_g05564 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene51042.t1 | EIF4A-2, Aspi01Gene51042 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Cba_g75441 | EIF4A-2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01015173001 | EIF4A-2 | Protein biosynthesis.translation initiation.mRNA... | 0.02 | OrthoFinder output from all 47 species | |
Gb_05983 | EIF4A-2 | mRNA unwinding factor (eIF4A) | 0.02 | OrthoFinder output from all 47 species | |
Len_g57124 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10427502g0010 | EIF4A-2 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
MA_1954g0010 | EIF4A-2 | Eukaryotic initiation factor 4A-1 OS=Oryza sativa subsp.... | 0.02 | OrthoFinder output from all 47 species | |
Mp4g09540.1 | EIF4A-III | helicase component eIF4A3 of RNA quality control Exon... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g13467 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pp3c7_3770V3.1 | EIF4A-2, Pp3c7_3770 | eukaryotic translation initiation factor 4A1 | 0.01 | OrthoFinder output from all 47 species | |
Smo164382 | EIF4A-III | RNA processing.RNA quality control Exon Junction complex... | 0.02 | OrthoFinder output from all 47 species | |
Solyc06g062800.4.1 | EIF4A-2, Solyc06g062800 | mRNA unwinding factor (eIF4A) | 0.03 | OrthoFinder output from all 47 species | |
Spa_g05949 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g05567 | EIF4A-2 | mRNA unwinding factor *(eIF4A)) & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | HCCA |
MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0003743 | translation initiation factor activity | IEP | HCCA |
MF | GO:0003879 | ATP phosphoribosyltransferase activity | IEP | HCCA |
MF | GO:0004843 | cysteine-type deubiquitinase activity | IEP | HCCA |
CC | GO:0005737 | cytoplasm | IEP | HCCA |
CC | GO:0005777 | peroxisome | IEP | HCCA |
BP | GO:0006413 | translational initiation | IEP | HCCA |
BP | GO:0006508 | proteolysis | IEP | HCCA |
BP | GO:0006547 | histidine metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
MF | GO:0008233 | peptidase activity | IEP | HCCA |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
MF | GO:0016763 | pentosyltransferase activity | IEP | HCCA |
MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
CC | GO:0042579 | microbody | IEP | HCCA |
BP | GO:0044238 | primary metabolic process | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
MF | GO:0101005 | deubiquitinase activity | IEP | HCCA |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
No external refs found! |