1. Home
  2. Species
  3. Abrodictyum obscurum
  4. Sequence
  5. Aob_g01648

Aob_g01648


Description : GARP subgroup PHL transcription factor & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g01648

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00224230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00071020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Adi_g025472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32108 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aop_g37611 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32964.t1 Aspi01Gene32964 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene69267.t1 PHL1, Aspi01Gene69267 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g11144 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16839 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g17095 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g26945 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G015300.1 Ceric.07G015300 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G047900.1 Ceric.11G047900 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g14482 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15392 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g27743 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02950 No alias GARP subgroup PHL transcription factor & original... 0.06 OrthoFinder output from all 47 species
Dcu_g38693 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g39292 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01011163001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
Len_g22909 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Len_g59713 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g25465 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g02075 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g66199 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g04532 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0069.g016534 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g08411 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.01 OrthoFinder output from all 47 species
Spa_g55221 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 62 112
IPR025756 Myb_CC_LHEQLE 145 191
No external refs found!