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  5. Aob_g01431

Aob_g01431


Description : not classified & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g01431
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 CIA2,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 OrthoFinder output from all 47 species
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.03 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18419.t1 Aspi01Gene18419 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26917 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G070500.1 Ceric.08G070500 BBX class-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dac_g12836 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g20875 No alias CMF transcription factor & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g23913 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ehy_g06850 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07785 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os02g49880.1 LOC_Os02g49880 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.05 OrthoFinder output from all 47 species
LOC_Os06g15330.1 LOC_Os06g15330 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Len_g23704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_470965g0010 No alias transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species
Ore_g16447 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28029 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g60427 No alias BBX class-III transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007602 No alias not classified & original description: CDS=193-1710 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Solyc03g119540.3.1 Solyc03g119540 transcription factor (BBX-CO) 0.01 OrthoFinder output from all 47 species
Spa_g04603 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 376 418
No external refs found!