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  5. Aob_g00946

Aob_g00946 (VAMP727, ATVAMP727)


Aliases : VAMP727, ATVAMP727

Description : R-type VAMP7-group component of SNARE longin membrane fusion complex & original description: none


Gene families : OG0000720 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000720_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g00946

Target Alias Description ECC score Gene Family Method Actions
Adi_g013811 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.02 OrthoFinder output from all 47 species
Dac_g30964 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
LOC_Os07g09600.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
LOC_Os07g14540.1 ATVAMP725,... R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 OrthoFinder output from all 47 species
LOC_Os08g44430.2 VAMP727,... VAMP7-type R-type SNARE longin protein 0.04 OrthoFinder output from all 47 species
Lfl_g22017 ATVAMP721,... R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
MA_92947g0030 VAMP726, ATVAMP726 VAMP7-type R-type SNARE longin protein 0.03 OrthoFinder output from all 47 species
Ore_g04687 VAMP727, ATVAMP727 R-type VAMP7-group component of SNARE longin membrane... 0.03 OrthoFinder output from all 47 species
Pp3c4_13580V3.1 ATVAMP725,... vesicle-associated membrane protein 726 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR010908 Longin_dom 32 100
IPR042855 V_SNARE_CC 145 231
No external refs found!