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  5. Aob_g00844

Aob_g00844


Description : substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g00844

Target Alias Description ECC score Gene Family Method Actions
AT1G16250 No alias Galactose oxidase/kelch repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Als_g02525 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene40784.t1 Aspi01Gene40784 substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Cba_g10152 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
LOC_Os10g26990.1 LOC_Os10g26990 phenylpropanoid biosynthesis regulator (SAGL1) 0.05 OrthoFinder output from all 47 species
Pir_g12112 No alias substrate adaptor *(ARKP1) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g12494 No alias substrate(PAL) adaptor of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pir_g19352 SKIP6 substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g03706 No alias substrate adaptor of SCF E3 ubiquitin ligase *(AFR) &... 0.03 OrthoFinder output from all 47 species
Sam_g19058 No alias substrate adaptor *(SKIP6) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Smo99292 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc01g005970.3.1 Solyc01g005970 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species
Solyc01g022740.3.1 Solyc01g022740 phenylpropanoid biosynthesis regulator (SAGL1) 0.04 OrthoFinder output from all 47 species
Zm00001e000513_P002 Zm00001e000513 phenylpropanoid biosynthesis regulator (SAGL1) 0.02 OrthoFinder output from all 47 species
Zm00001e010956_P001 SKIP6, Zm00001e010956 F-box/kelch-repeat protein SKIP6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e013448_P001 SKIP4, Zm00001e013448 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 192 233
IPR006652 Kelch_1 133 186
No external refs found!