Aob_g00169


Description : component *(RPP1) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000349_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aob_g00169
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
Ala_g12510 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g64518 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cre17.g738300 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.01 OrthoFinder output from all 47 species
Dcu_g28301 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Pir_g14549 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Pir_g44007 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c1_36220V3.1 Pp3c1_36220 60S acidic ribosomal protein family 0.02 OrthoFinder output from all 47 species
Pp3c23_18100V3.1 Pp3c23_18100 60S acidic ribosomal protein family 0.01 OrthoFinder output from all 47 species
Sam_g26274 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g47755 No alias component *(RPP1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e021844_P001 Zm00001e021844 component RPP1 of LSU proteome component 0.08 OrthoFinder output from all 47 species
Zm00001e029197_P001 Zm00001e029197 component RPP1 of LSU proteome component 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA

No InterPro domains available for this sequence

No external refs found!