Dde_g52009 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g52009
Cluster HCCA: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g013826 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g076358 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g085223 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g109057 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g17656 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57094 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03219 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g07674 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11268 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11906 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g16507 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16821 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16847 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17269 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18367 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18707 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g19645 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20132 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23571 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26859 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27463 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28399 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28413 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28684 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28698 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g42334 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67765 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g67896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67898 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69562 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene02394.t1 Aspi01Gene02394 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012368 No alias not classified & original description: CDS=1-2025 0.04 OrthoFinder output from all 47 species
Azfi_s0129.g048869 No alias not classified & original description: CDS=1-2157 0.03 OrthoFinder output from all 47 species
Azfi_s0889.g091250 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Cba_g02715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29942 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G018600.1 Ceric.01G018600 not classified & original description: pacid=50592052... 0.03 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.04 OrthoFinder output from all 47 species
Ceric.02G049700.1 Ceric.02G049700 not classified & original description: pacid=50584245... 0.04 OrthoFinder output from all 47 species
Ceric.04G031200.1 Ceric.04G031200 not classified & original description: pacid=50630737... 0.06 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.03 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.05 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.04 OrthoFinder output from all 47 species
Ceric.07G091600.1 Ceric.07G091600 not classified & original description: pacid=50627346... 0.03 OrthoFinder output from all 47 species
Ceric.09G009700.1 Ceric.09G009700 not classified & original description: pacid=50587563... 0.04 OrthoFinder output from all 47 species
Ceric.09G010600.1 CRR22, Ceric.09G010600 ssDNA-binding protein *(OSB) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Ceric.10G031500.1 OTP84, Ceric.10G031500 not classified & original description: pacid=50611993... 0.06 OrthoFinder output from all 47 species
Ceric.12G034200.1 OTP84, Ceric.12G034200 not classified & original description: pacid=50601806... 0.05 OrthoFinder output from all 47 species
Ceric.12G036800.1 Ceric.12G036800 not classified & original description: pacid=50601765... 0.04 OrthoFinder output from all 47 species
Ceric.12G090300.1 Ceric.12G090300 not classified & original description: pacid=50600499... 0.04 OrthoFinder output from all 47 species
Ceric.15G066400.1 Ceric.15G066400 not classified & original description: pacid=50640755... 0.04 OrthoFinder output from all 47 species
Ceric.18G069700.1 CRR2, Ceric.18G069700 not classified & original description: pacid=50622363... 0.04 OrthoFinder output from all 47 species
Ceric.18G077200.1 Ceric.18G077200 not classified & original description: pacid=50621761... 0.04 OrthoFinder output from all 47 species
Ceric.19G075900.1 Ceric.19G075900 not classified & original description: pacid=50576584... 0.03 OrthoFinder output from all 47 species
Ceric.1Z079200.1 CRR22, Ceric.1Z079200 not classified & original description: pacid=50582193... 0.03 OrthoFinder output from all 47 species
Ceric.23G075200.1 Ceric.23G075200 not classified & original description: pacid=50610693... 0.04 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.04 OrthoFinder output from all 47 species
Ceric.28G015300.1 Ceric.28G015300 not classified & original description: pacid=50570535... 0.04 OrthoFinder output from all 47 species
Ceric.29G081200.1 OTP86, Ceric.29G081200 not classified & original description: pacid=50624479... 0.05 OrthoFinder output from all 47 species
Ceric.32G058000.1 Ceric.32G058000 not classified & original description: pacid=50598467... 0.03 OrthoFinder output from all 47 species
Ceric.33G050800.1 CRR22, Ceric.33G050800 not classified & original description: pacid=50606654... 0.02 OrthoFinder output from all 47 species
Ceric.33G060200.1 Ceric.33G060200 not classified & original description: pacid=50607485... 0.04 OrthoFinder output from all 47 species
Ceric.34G039000.1 Ceric.34G039000 not classified & original description: pacid=50623583... 0.04 OrthoFinder output from all 47 species
Ceric.35G018800.1 Ceric.35G018800 not classified & original description: pacid=50580757... 0.04 OrthoFinder output from all 47 species
Ceric.35G064900.1 Ceric.35G064900 not classified & original description: pacid=50581299... 0.05 OrthoFinder output from all 47 species
Ceric.36G059800.1 Ceric.36G059800 not classified & original description: pacid=50568853... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g03843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g15068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18279 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g29194 CRR2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32771 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42858 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08279 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08966 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g10377 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17307 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21350 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g26044 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31896 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35843 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35896 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g40976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01021756001 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Gb_34736 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os08g37520.1 LOC_Os08g37520 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g05316 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g12108 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g46281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56586 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g07121 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10164206g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_179801g0020 EMB2261 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_20746g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
MA_31170g0010 CRR22 RNA editing factor (MEF19) 0.02 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_381817g0020 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_38266g0010 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.03 OrthoFinder output from all 47 species
MA_4438g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_525914g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_94165g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14901 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g45777 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g03803 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03105 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12230 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12561 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13006 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18532 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g19109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g32296 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013331 No alias not classified & original description: CDS=1-2106 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0244.g026675 No alias not classified & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Sam_g11237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18597 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo105729 No alias Pentatricopeptide repeat-containing protein At2g03380,... 0.04 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g13913 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g15123 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g30057 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49347 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53482 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54207 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g54422 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g04722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10679 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11066 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26639 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 97 120
IPR002885 Pentatricopeptide_repeat 400 423
IPR002885 Pentatricopeptide_repeat 198 220
IPR002885 Pentatricopeptide_repeat 500 525
IPR002885 Pentatricopeptide_repeat 425 472
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 223 270
IPR002885 Pentatricopeptide_repeat 326 373
IPR002885 Pentatricopeptide_repeat 22 69
No external refs found!