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  5. Dde_g51705

Dde_g51705 (ATRDRP1, RDR1)


Aliases : ATRDRP1, RDR1

Description : not classified & original description: none


Gene families : OG0001039 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001039_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g51705

Target Alias Description ECC score Gene Family Method Actions
AT4G11130 SMD1, RDR2 RNA-dependent RNA polymerase 2 0.02 OrthoFinder output from all 47 species
Aspi01Gene17564.t1 SDE1, RDR6,... ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33144.t2 ATRDRP1, RDR1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g14760 SDE1, RDR6, SGS2 ssRNA polymerase *(RDR6) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.19G025000.1 ATRDRP1, RDR1,... not classified & original description: pacid=50576328... 0.04 OrthoFinder output from all 47 species
Solyc03g114140.3.1 SMD1, RDR2,... ssRNA polymerase (RDR2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003968 RNA-dependent RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005315 inorganic phosphate transmembrane transporter activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 445 1028
No external refs found!