Dde_g48522

Description : unmethylated miRNA exoribonuclease *(ATRM2) & original description: none

Gene families : OG0003776 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003776_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g48522
Cluster	HCCA: Cluster_151

Target	Alias	Description	ECC score	Gene Family Method
Aspi01Gene62627.t1	Aspi01Gene62627	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.03	OrthoFinder output from all 47 species
Cba_g14205	No alias	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g10759	No alias	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.03	OrthoFinder output from all 47 species
Nbi_g17040	No alias	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014033	No alias	component *(eIF4E) of eIF4F mRNA unwinding complex &...	0.02	OrthoFinder output from all 47 species
Sam_g29643	No alias	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.03	OrthoFinder output from all 47 species
Spa_g26140	No alias	unmethylated miRNA exoribonuclease *(ATRM2) & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0055085	transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002562	3'-5'_exonuclease_dom	339	514

External Links

No external refs found!