AMTR_s00025p00224230 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.314

Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG_01_0000027 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000027_tree ,
OG_02_0010926 (LandPlants) Phylogenetic Tree(s): OG_02_0010926_tree ,
OG_03_0010867 (SeedPlants) Phylogenetic Tree(s): OG_03_0010867_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00224230
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AT1G14600 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT2G42660 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G13040 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
GSVIVT01005342001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_25992 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Gb_27262 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os02g46940.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os03g03760.1 No alias G2-like GARP transcription factor 0.01 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.02 Archaeplastida
LOC_Os08g25799.1 No alias G2-like GARP transcription factor 0.01 Archaeplastida
LOC_Os10g39550.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_335624g0020 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c13_23440V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c14_26270V3.1 No alias myb-like HTH transcriptional regulator family protein 0.01 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c3_30710V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Smo405399 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc06g066340.4.1 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e014339_P001 No alias Putative Myb family transcription factor At1g14600... 0.01 Archaeplastida
Zm00001e023282_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e033396_P003 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e037761_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 LandPlants
Zm00001e013626_P001 No alias G2-like GARP transcription factor 0.01 LandPlants
GSVIVT01029458001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 318 366
IPR001005 SANT/Myb 231 282
No external refs found!