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  5. Dde_g47581

Dde_g47581 (ATRD22, RD22)


Aliases : ATRD22, RD22

Description : not classified & original description: none


Gene families : OG0000218 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000218_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g47581
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00173800 PG2,... Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
AMTR_s00059p00088650 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
AMTR_s00059p00190970 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00059p00191030 ATRD22, RD22,... BURP domain protein RD22 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00076p00180150 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00021460 evm_27.TU.AmTr_v1... BURP domain protein RD22 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G23760 JP630, PG3 BURP domain-containing protein 0.02 OrthoFinder output from all 47 species
AT1G60390 PG1 polygalacturonase 1 0.03 OrthoFinder output from all 47 species
AT1G70370 PG2 polygalacturonase 2 0.03 OrthoFinder output from all 47 species
Adi_g046811 PG1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g075863 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g075864 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g078179 PG1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g078180 PG1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g38151 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10038 PG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12539 ATRD22, RD22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g06653 ATRD22, RD22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aspi01Gene38555.t1 ATRD22, RD22,... not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G022400.1 ATRD22, RD22,... not classified & original description: pacid=50572685... 0.04 OrthoFinder output from all 47 species
Ceric.17G074900.1 PG2, Ceric.17G074900 not classified & original description: pacid=50618228... 0.03 OrthoFinder output from all 47 species
Dac_g09864 ATRD22, RD22 not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g16859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18144 ATRD22, RD22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12782 PG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g20107 PG2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_39304 ATRD22, RD22 BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os01g53240.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os05g12630.1 LOC_Os05g12630 BURP domain-containing protein 1 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os08g29200.1 PG2, LOC_Os08g29200 non-catalytic polygalacturonase regulator 0.04 OrthoFinder output from all 47 species
LOC_Os08g38810.1 ATRD22, RD22,... BURP domain-containing protein 13 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os11g06980.1 ATRD22, RD22,... BURP domain-containing protein 17 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g13687 ATRD22, RD22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g55574 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55608 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10425868g0010 USPL1, ATUSPL1 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10436065g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_161552g0010 PG2 BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_203282g0010 No alias BURP domain-containing protein 16 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_462957g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_565982g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_63321g0010 ATRD22, RD22 BURP domain protein RD22 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_8888577g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g06951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g06952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g29071 PG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g37368 PG1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11148 PG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14752 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g60183 PG2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011800 ATRD22, RD22 not classified & original description: CDS=1-1551 0.04 OrthoFinder output from all 47 species
Smo229182 No alias Polygalacturonase non-catalytic subunit AroGP3... 0.02 OrthoFinder output from all 47 species
Smo77483 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc08g068130.1.1 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Spa_g12000 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g12001 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g29037 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49176 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g05891 PG2 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Tin_g14435 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19046 ATRD22, RD22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20244 ATRD22, RD22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003438_P003 ATRD22, RD22,... Protein RAFTIN 1A OS=Triticum aestivum... 0.04 OrthoFinder output from all 47 species
Zm00001e003891_P006 Zm00001e003891 BURP domain-containing protein 11 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e019897_P001 ATRD22, RD22,... BURP domain-containing protein 3 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Zm00001e022326_P001 PG2, Zm00001e022326 non-catalytic polygalacturonase regulator 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004873 BURP_dom 166 356
No external refs found!