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  5. Dde_g47424

Dde_g47424 (ATSPO11-1)


Aliases : ATSPO11-1

Description : not classified & original description: none


Gene families : OG0001338 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001338_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g47424
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
Aop_g35567 SPO11-2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g008123 SPO11-2 component a *(SPO11) of meiotic topoisomerase-VI complex... 0.02 OrthoFinder output from all 47 species
LOC_Os03g17610.1 BIN5, RHL2,... DNA topoisomerase 6 subunit A3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005694 chromosome IEA Interproscan
BP GO:0006259 DNA metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
InterPro domains Description Start Stop
IPR013049 Spo11/TopoVI_A_N 80 141
No external refs found!