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  5. Dde_g46900

Dde_g46900


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46900

Target Alias Description ECC score Gene Family Method Actions
Als_g10416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25946 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g57127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.05 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06340 CRM3, HCF152 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13290 EMB2279, EMB88 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g21700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g49332 CRM3, HCF152 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g12024 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
MF GO:0009975 cyclase activity IEP HCCA
MF GO:0009976 tocopherol cyclase activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 326 380
IPR033443 PPR_long 384 502
IPR002885 Pentatricopeptide_repeat 264 292
No external refs found!