1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00025p00218830

AMTR_s00025p00218830 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.304

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase


Gene families : OG_01_0010905 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010905_tree ,
OG_02_0010842 (LandPlants) Phylogenetic Tree(s): OG_02_0010842_tree ,
OG_03_0036949 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00218830
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
MA_183114g0010 No alias 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_35727g0020 No alias 3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_880820g0010 No alias 3-ketoacyl-CoA synthase 20 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006633 fatty acid biosynthetic process IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013601 FAE1_typ3_polyketide_synth 3 119
IPR013747 ACP_syn_III_C 148 228
No external refs found!