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Aliases : OTP86
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00256920 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00130p00019530 | DOT4,... | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G68930 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G39530 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g005234 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005755 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g005797 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g016172 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g034232 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g035612 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g036756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060665 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g067156 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g067220 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g069102 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g069195 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g41951 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11078 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g21902 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g25745 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07079 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19310 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05294 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27009 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g03827 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g16849 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene10587.t1 | CRR2, Aspi01Gene10587 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene30532.t1 | Aspi01Gene30532 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0012.g012931 | No alias | not classified & original description: CDS=1-3024 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036254 | No alias | not classified & original description: CDS=1-1464 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0128.g048815 | No alias | not classified & original description: CDS=1-1722 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g20531 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g34541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G011500.1 | Ceric.03G011500 | not classified & original description: pacid=50571528... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.14G006100.1 | Ceric.14G006100 | not classified & original description: pacid=50634395... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.14G059200.1 | Ceric.14G059200 | not classified & original description: pacid=50634117... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.22G077500.1 | Ceric.22G077500 | not classified & original description: pacid=50615168... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.28G001700.1 | Ceric.28G001700 | not classified & original description: pacid=50570577... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.28G037300.1 | Ceric.28G037300 | not classified & original description: pacid=50570602... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G032400.1 | CRR22, Ceric.31G032400 | not classified & original description: pacid=50574168... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.39G022100.1 | Ceric.39G022100 | not classified & original description: pacid=50582510... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g07052 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17701 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g04822 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g18296 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24823 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g14946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g13692 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g16104 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03052 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g20095 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23954 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02564 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17297 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g28912 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g49137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57507 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03488 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g16163 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g23618 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g30641 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g30997 | OTP84 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g03628 | REME1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07605 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g14215 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g43670 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54615 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59214 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59290 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g63082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0264.g026932 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g03385 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g08403 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g19460 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo125795 | REME1 | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
| Smo78179 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18416 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20273 | LPA66 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g54234 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g55575 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g03535 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006457 | protein folding | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| CC | GO:0016272 | prefoldin complex | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR046848 | E_motif | 749 | 811 |
| IPR002885 | Pentatricopeptide_repeat | 129 | 156 |
| IPR002885 | Pentatricopeptide_repeat | 2 | 20 |
| IPR002885 | Pentatricopeptide_repeat | 301 | 323 |
| IPR002885 | Pentatricopeptide_repeat | 706 | 730 |
| IPR002885 | Pentatricopeptide_repeat | 630 | 678 |
| IPR002885 | Pentatricopeptide_repeat | 430 | 477 |
| IPR002885 | Pentatricopeptide_repeat | 26 | 72 |
| IPR002885 | Pentatricopeptide_repeat | 227 | 276 |
| IPR002885 | Pentatricopeptide_repeat | 328 | 375 |
| IPR002885 | Pentatricopeptide_repeat | 531 | 579 |
| No external refs found! |