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  5. Dde_g46165

Dde_g46165 (AMS)


Aliases : AMS

Description : transcriptional regulator *(DYT1/AMS) & original description: none


Gene families : OG0006543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46165
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.13 OrthoFinder output from all 47 species
Adi_g014788 AMS transcriptional regulator *(DYT1/AMS) & original... 0.05 OrthoFinder output from all 47 species
Adi_g087464 AMS transcriptional regulator *(DYT1/AMS) & original... 0.05 OrthoFinder output from all 47 species
Adi_g105556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70080 AMS transcriptional regulator *(DYT1/AMS) & original... 0.25 OrthoFinder output from all 47 species
Ceric.15G077800.1 AMS, Ceric.15G077800 transcriptional regulator *(DYT1/AMS) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g12007 AMS transcriptional regulator *(DYT1/AMS) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01013720001 AMS RNA biosynthesis.transcriptional activation.bHLH... 0.08 OrthoFinder output from all 47 species
GSVIVT01013744001 AMS RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01024008001 AMS RNA biosynthesis.transcriptional activation.bHLH... 0.07 OrthoFinder output from all 47 species
LOC_Os02g02820.1 AMS, LOC_Os02g02820 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Len_g57915 AMS transcriptional regulator *(DYT1/AMS) & original... 0.07 OrthoFinder output from all 47 species
MA_89559g0020 No alias Transcription factor ABORTED MICROSPORES OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Msp_g44010 AMS transcriptional regulator *(DYT1/AMS) & original... 0.14 OrthoFinder output from all 47 species
Nbi_g11389 AMS transcriptional regulator *(DYT1/AMS) & original... 0.21 OrthoFinder output from all 47 species
Ore_g07281 AMS transcriptional regulator *(DYT1/AMS) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g34078 AMS transcriptional regulator *(DYT1/AMS) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g01138 AMS transcriptional regulator *(DYT1/AMS) & original... 0.18 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009349 AMS transcriptional regulator *(DYT1/AMS) & original... 0.06 OrthoFinder output from all 47 species
Sam_g17963 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49026 No alias transcriptional regulator *(DYT1/AMS) & original... 0.05 OrthoFinder output from all 47 species
Solyc08g062780.2.1 AMS, Solyc08g062780 transcription factor (bHLH) 0.15 OrthoFinder output from all 47 species
Spa_g47867 AMS transcriptional regulator *(DYT1/AMS) & original... 0.21 OrthoFinder output from all 47 species
Tin_g45475 AMS transcriptional regulator *(DYT1/AMS) & original... 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 6 152
IPR011598 bHLH_dom 400 443
No external refs found!