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  5. Dde_g46004

Dde_g46004 (GATL3)


Aliases : GATL3

Description : galacturonosyltransferase & original description: none


Gene families : OG0000478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g46004

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00136940 GATL4,... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.05 OrthoFinder output from all 47 species
AMTR_s00147p00025700 GATL7,... Cell wall.hemicellulose.xylan.synthesis.galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
AT1G19300 GLZ1, GATL1,... Nucleotide-diphospho-sugar transferases superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G06260 GATL4 galacturonosyltransferase-like 4 0.02 OrthoFinder output from all 47 species
AT3G50760 GATL2 galacturonosyltransferase-like 2 0.03 OrthoFinder output from all 47 species
Als_g05607 GATL4 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g39458 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02073 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g09248 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G089900.1 GATL3, Ceric.09G089900 galacturonosyltransferase & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g08288 GATL3 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g03480 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011066001 GATL4 Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01017857001 No alias Probable galacturonosyltransferase-like 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01020141001 GATL9, LGT8 Probable galacturonosyltransferase-like 9 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_09765 GATL3 galacturonosyltransferase 0.05 OrthoFinder output from all 47 species
LOC_Os02g50600.1 GATL9, LGT8,... galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
LOC_Os03g18890.1 GATL7, LOC_Os03g18890 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Lfl_g17053 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05769 GATL3 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g05770 GATL3 galacturonosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g27516 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31598 LGT10, GATL6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g40150 GATL3 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10830 GATL7 galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24913 GATL7 galacturonosyltransferase & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g004971 GATL7 galacturonosyltransferase & original description: CDS=1-1182 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012757 GATL7 not classified & original description: CDS=1-1497 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0139.g022657 LGT10, GATL6 galacturonosyltransferase & original description: CDS=1-1368 0.04 OrthoFinder output from all 47 species
Sam_g11696 No alias galacturonosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100210.3.1 GATL7, Solyc01g100210 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Solyc09g074080.3.1 GATL4, Solyc09g074080 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Spa_g43810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47142 GATL7 galacturonosyltransferase & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e001382_P001 GATL7, Zm00001e001382 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e001733_P001 GATL4, Zm00001e001733 galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e015772_P001 GATL9, LGT8,... galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e035724_P001 GATL4, Zm00001e035724 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species
Zm00001e036043_P001 GATL9, LGT8,... galacturonosyltransferase 0.02 OrthoFinder output from all 47 species
Zm00001e038370_P001 GATL7, Zm00001e038370 galacturonosyltransferase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016757 glycosyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002495 Glyco_trans_8 102 357
No external refs found!