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  5. Dde_g44934

Dde_g44934 (PGP11)


Aliases : PGP11

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g44934

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 ABCB19,... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.03 OrthoFinder output from all 47 species
Aspi01Gene52651.t1 PGP2, Aspi01Gene52651 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0039.g026389 PGP11 subfamily ABCB transporter & original description: CDS=323-4378 0.02 OrthoFinder output from all 47 species
Gb_08702 No alias subfamily ABCB transporter 0.04 OrthoFinder output from all 47 species
Gb_18150 PGP13 auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Gb_32487 PGP1, ABCB1, ATPGP1 subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
LOC_Os04g38570.1 ABCB19,... auxin efflux transporter (ABCB19) 0.02 OrthoFinder output from all 47 species
MA_10432169g0010 PGP11 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
MA_9253g0010 No alias subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Mp3g11830.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.03 OrthoFinder output from all 47 species
Sam_g03287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g122070.3.1 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Tin_g11244 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e017014_P001 ALA2, Zm00001e017014 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 394 542
IPR011527 ABC1_TM_dom 727 997
IPR011527 ABC1_TM_dom 53 326
IPR003439 ABC_transporter-like_ATP-bd 1065 1214
No external refs found!