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  5. MA_115502g0010

MA_115502g0010


Description : 27.3.3 RNA.regulation of transcription.AP2/EREBP, APETALA2/Ethylene-responsive element binding protein family encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein


Gene families : OG_01_0000000 (Gene family) Phylogenetic Tree(s): OG0000000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_115502g0010
Cluster HCCA cluster: Cluster_342

Target Alias Description ECC score Gene Family Method Actions
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Gene family
AT1G15360 WIN1, SHN1 Integrase-type DNA-binding superfamily protein 0.02 Gene family
AT3G14230 RAP2.2 related to AP2 2 0.02 Gene family
GSVIVT01017542001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01021060001 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
GSVIVT01036201001 No alias No description available 0.02 Gene family
LOC_Os02g43970 Os02g0657000 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family
LOC_Os03g08470 Os03g0183000 No description available 0.02 Gene family
LOC_Os04g46400 Os04g0549700 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
LOC_Os05g41780 Os05g0497300 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
LOC_Os08g31580 Os08g0408500 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.06 Gene family
LOC_Os09g39850 Os09g0572000 No description available 0.04 Gene family
MA_10031781g0010 No alias No description available 0.03 Gene family
MA_10430231g0010 No alias 17.5.2 hormone metabolism.ethylene.signal transduction... 0.02 Gene family
MA_10430769g0010 No alias 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Smo104980 PACid_15415938 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc01g090370.2.1 Solyc01g090370.2 No description available 0.01 Gene family
Solyc03g005500.1.1 Solyc03g005500.1 No description available 0.01 Gene family
Solyc06g066540.1.1 Solyc06g066540.1 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Solyc10g009110.1.1 Solyc10g009110.1 No description available 0.02 Gene family
Zm00001d009622 GRMZM2G100982 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d019744 GRMZM2G060517 No description available 0.02 Gene family
Zm00001d020595 GRMZM2G052667 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.03 Gene family
Zm00001d048297 GRMZM2G399098 27.3.3 RNA.regulation of transcription.AP2/EREBP,... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 69 118
No external refs found!