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  5. Dde_g41852

Dde_g41852


Description : component *(NSP2) of NSP1-NSP2 nodulation initiation complex & original description: none


Gene families : OG0002153 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g41852
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00030p00099410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.02 OrthoFinder output from all 47 species
AMTR_s00156p00061400 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.02 OrthoFinder output from all 47 species
Adi_g043317 No alias GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115825 RGA2, GAI GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g45970 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 485 854
No external refs found!