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  5. Dde_g40960

Dde_g40960 (LUX, PCL1)


Aliases : LUX, PCL1

Description : component *(LUX) of circadian clock Evening complex (EC) & original description: none


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g40960

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00182350 RR12, ARR12,... RNA biosynthesis.transcriptional activation.ARR-B... 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00128190 evm_27.TU.AmTr_v1... Transcription factor LUX OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g054623 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081824 RR2, ARR2 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02179 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06717 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g20636 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23573 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00999.t1 RR2, ARR2,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31778.t1 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31778.t2 RR12, ARR12,... subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g59744 RR14, ARR14 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g094150 APRR9, TL1, PRR9 Two-component response regulator-like APRR9... 0.01 OrthoFinder output from all 47 species
Ehy_g04944 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14477 RR14, ARR14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20630 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007549001 ARR11 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
Gb_10394 ARR1, RR1 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
LOC_Os02g08500.1 ARR10, RR10,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
LOC_Os05g34110.1 LOC_Os05g34110 Transcription factor MYBC1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g08440.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Lfl_g28555 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g21083 ARR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01434 LUX, PCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01350 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001234 RR12, ARR12 subgroup ARR-B transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g065540.3.1 ARR1, RR1, Solyc01g065540 B-type cytokinin ARR response activator. transcription... 0.03 OrthoFinder output from all 47 species
Solyc07g005140.4.1 RR12, ARR12,... B-type cytokinin ARR response activator. transcription... 0.02 OrthoFinder output from all 47 species
Spa_g06387 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19044 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24857 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Spa_g29793 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Tin_g36879 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 267 315
No external refs found!